About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41167MRNA-CAPPING ENZYME
Paelopatides41168TRANSCRIPTION FACTOR MLR1/2
Paelopatides41169-
Paelopatides41170MORN REPEAT-CONTAINING PROTEIN 4
Paelopatides41171TESTIS DEVELOPMENT PROTEIN PRTD
Paelopatides41172SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52
Paelopatides41173SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52
Paelopatides41174SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52
Paelopatides41175CENTROSOME-ASSOCIATED PROTEIN 350
Paelopatides41176CENTROSOME-ASSOCIATED PROTEIN 350
Paelopatides41177-
Paelopatides41178-
Paelopatides41179PROTEIN CBG26694
Paelopatides41180PROTEIN CBG26694
Paelopatides41181PROTEIN CBG26694
Paelopatides41182PROTEIN CBG26694
Paelopatides41183-
Paelopatides41184-
Paelopatides41185PROTEIN CBG26694
Paelopatides41186-
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