About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41445N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT
Paelopatides41446EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED
Paelopatides41447VILLIN
Paelopatides41448VILLIN
Paelopatides41449REVERSE TRANSCRIPTASES
Paelopatides41450PROTEIN CBG26694
Paelopatides41451-
Paelopatides41452ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides41453REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41454-
Paelopatides41455-
Paelopatides41459POL PROTEIN
Paelopatides41460ENZYMATIC POLYPROTEIN-RELATED
Paelopatides41461CRUMBS FAMILY MEMBER
Paelopatides41462-
Paelopatides41463-
Paelopatides41464NUCLEAR RNA EXPORT FACTOR
Paelopatides41465HISTONE H3
Paelopatides41466REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41467-
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