About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43638-
Paelopatides43639-
Paelopatides43640-
Paelopatides43641F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides43642-
Paelopatides43643ELECTRON TRANSPORT OXIDOREDUCTASE
Paelopatides436444-HYDROXYPHENYLPYRUVATE DIOXYGENASE
Paelopatides43645PROTEIN CBG26694
Paelopatides43646ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides436474-HYDROXYPHENYLPYRUVATE DIOXYGENASE
Paelopatides43648ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides43649TRANSPOSABLE ELEMENT-RELATED
Paelopatides43650-
Paelopatides43651-
Paelopatides43652EXPRESSED PROTEIN
Paelopatides43653-
Paelopatides43654-
Paelopatides43655EPM2A-INTERACTING PROTEIN 1
Paelopatides43656NECTIN-RELATED
Paelopatides43657-
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