About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43573POTASSIUM CHANNEL, SUBFAMILY K
Paelopatides43574PROTEIN NAKED CUTICLE
Paelopatides43575HISTONE H2A
Paelopatides43576DNA POLYMERASE TYPE-X FAMILY MEMBER
Paelopatides43577TRANSPOSON
Paelopatides43578-
Paelopatides43579-
Paelopatides43580DNA2/NAM7 HELICASE FAMILY
Paelopatides43581ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides43582-
Paelopatides43583-
Paelopatides43584-
Paelopatides43585FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides43586FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides43587-
Paelopatides43588-
Paelopatides43589-
Paelopatides43590SINGLE STRANDED DNA BINDING PROTEIN
Paelopatides43591RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides43592ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
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