About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44821-
Paelopatides44822UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN
Paelopatides44823PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Paelopatides44824PEPTIDYLPROLYL ISOMERASE
Paelopatides44825FANCONI ANEMIA GROUP B PROTEIN
Paelopatides44826RCG42593, ISOFORM CRA_A
Paelopatides44827OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN
Paelopatides44829-
Paelopatides44830PROTEIN CBG26694
Paelopatides44831PROTEIN CBG26694
Paelopatides44832MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides44833POL PROTEIN
Paelopatides44834REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44835-
Paelopatides44836SI:CH211-196P9.1-RELATED
Paelopatides44837TRANSPOSABLE ELEMENT-RELATED
Paelopatides44838NEPHRIN
Paelopatides44839-
Paelopatides44840LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51
Paelopatides44841-
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