About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44801INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides44802-
Paelopatides44803-
Paelopatides44804-
Paelopatides44805ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides44806POL PROTEIN
Paelopatides44807ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides44808-
Paelopatides44809-
Paelopatides44810CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides44811RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides44812-
Paelopatides44813-
Paelopatides44814LEUCINE-RICH REPEAT-CONTAINING
Paelopatides44815TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
Paelopatides44816TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
Paelopatides44817CALCIUM BINDING PROTEIN
Paelopatides44818NUCLEOSIDE DIPHOSPHATE KINASE
Paelopatides44819SORTING NEXIN
Paelopatides44820SORTING NEXIN
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