About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44842-
Paelopatides44843ZGC:195170
Paelopatides44844FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44845ZINC FINGER PROTEIN
Paelopatides44846SUZ DOMAIN-CONTAINING PROTEIN 1
Paelopatides44847NOTCH LIGAND FAMILY MEMBER
Paelopatides44848PROTEASE M1 ZINC METALLOPROTEASE
Paelopatides44851-
Paelopatides44852-
Paelopatides44853-
Paelopatides44854CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED
Paelopatides44855-
Paelopatides44856REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44857SI:CH211-196P9.1-RELATED
Paelopatides44858-
Paelopatides44859PROTEIN FAM78A
Paelopatides44860-
Paelopatides4486126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED
Paelopatides44862-
Paelopatides44863POL PROTEIN
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