About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44864ENDONUCLEASE-RELATED
Paelopatides44865RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides44866-
Paelopatides44867RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides44868ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides44869INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides44870C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides44871-
Paelopatides44872-
Paelopatides44873-
Paelopatides44874BONUS, ISOFORM C-RELATED
Paelopatides44875-
Paelopatides44876-
Paelopatides44877APOPTOGENIC PROTEIN 1, MITOCHONDRIAL
Paelopatides44878-
Paelopatides44880-
Paelopatides44881TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides44882TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides44883INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
Paelopatides44884POL PROTEIN
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