About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45292PROTEIN CBG26694
Paelopatides45293-
Paelopatides45294-
Paelopatides45295REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45296METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE
Paelopatides45297FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45298FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45299PROTEIN RCC2
Paelopatides45300FUMARATE HYDRATASE-RELATED
Paelopatides45301-
Paelopatides45302-
Paelopatides45303CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides45304-
Paelopatides45305-
Paelopatides45306INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides45308HEAT SHOCK PROTEIN HSP-12.2-RELATED
Paelopatides45309HEAT SHOCK PROTEIN HSP-12.2-RELATED
Paelopatides45310HEAT SHOCK PROTEIN HSP-12.2-RELATED
Paelopatides45311HEAT SHOCK PROTEIN HSP-12.2-RELATED
Paelopatides45312ALPHA-2,8-SIALYLTRANSFERASE
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