About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45188IMMUNOGLOBULIN
Paelopatides45189IMMUNOGLOBULIN
Paelopatides45190TITIN
Paelopatides45191CONTACTIN 5
Paelopatides45192IMMUNOGLOBULIN
Paelopatides45193BASIGIN RELATED
Paelopatides45194BASIGIN RELATED
Paelopatides45195-
Paelopatides45196PROTEIN SIDEKICK
Paelopatides45197IMMUNOGLOBULIN
Paelopatides45198IMMUNOGLOBULIN
Paelopatides45199-
Paelopatides45201IMMUNOGLOBULIN
Paelopatides45202MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
Paelopatides45203MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
Paelopatides45204MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
Paelopatides45205MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
Paelopatides45206-
Paelopatides45207IMMUNOGLOBULIN
Paelopatides45208PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
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