About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45168-
Paelopatides45169THADA/DEATH RECEPTOR INTERACTING PROTEIN
Paelopatides45170-
Paelopatides45171CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides45172CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides45173NADH-CYTOCHROME B5 REDUCTASE
Paelopatides45174CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides45175NETRIN RECEPTOR UNC5
Paelopatides45176-
Paelopatides45177-
Paelopatides45178-
Paelopatides45179ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides45180METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides45181-
Paelopatides45182-
Paelopatides45183-
Paelopatides45184-
Paelopatides45185PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
Paelopatides45186-
Paelopatides45187SEC14 DOMAIN AND SPECTRIN REPEAT-CONTAINING PROTEIN 1
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