About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45375HMG-BOX TRANSCRIPTION FACTOR BBX
Paelopatides45376-
Paelopatides45377-
Paelopatides45378CELL SURFACE GLYCOPROTEIN MUC18-RELATED
Paelopatides45379NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides45380NXPE FAMILY MEMBER
Paelopatides45381-
Paelopatides45382N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE
Paelopatides45383-
Paelopatides45384INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides45385-
Paelopatides45386NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED
Paelopatides45387UNCHARACTERIZED
Paelopatides45388-
Paelopatides45389-
Paelopatides45390SI:CH211-196P9.1-RELATED
Paelopatides45391L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides45392GLYCOPROTEIN HORMONE RECEPTOR
Paelopatides45393VINCULIN
Paelopatides45394-
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