About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45437GTP-BINDING
Paelopatides45438-
Paelopatides45439GTP-BINDING
Paelopatides45440-
Paelopatides45441SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
Paelopatides45442-
Paelopatides45443HISTONE ACETYLTRANSFERASE
Paelopatides45444HISTONE ACETYLTRANSFERASE
Paelopatides45445ARGININE OR CREATINE KINASE
Paelopatides45446NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1
Paelopatides45447FAM98
Paelopatides45448PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED
Paelopatides45449-
Paelopatides45450ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides45451-
Paelopatides45452CENTROSOMAL PROTEIN OF 76 KDA
Paelopatides45453FLAVIN MONOAMINE OXIDASE
Paelopatides45454INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINAL
Paelopatides45455FLAVIN MONOAMINE OXIDASE
Paelopatides45456-
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