About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45477REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45478-
Paelopatides45479REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45480PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides45481-
Paelopatides45482FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45483-
Paelopatides45484L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides45485-
Paelopatides45486REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45487REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45488-
Paelopatides45489-
Paelopatides45490-
Paelopatides45491CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5
Paelopatides45492CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5
Paelopatides45493-
Paelopatides45494-
Paelopatides45495REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45496GH11358P
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