About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45497TESTICULAR SOLUBLE ADENYLYL CYCLASE
Paelopatides45498TESTICULAR SOLUBLE ADENYLYL CYCLASE
Paelopatides45499-
Paelopatides45500-
Paelopatides45501DNA HELICASE RECQ FAMILY MEMBER
Paelopatides45502REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45503FOIE GRAS
Paelopatides45504-
Paelopatides45505-
Paelopatides45506DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED
Paelopatides45507MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides45508MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides45509-
Paelopatides45510MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides45511L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides45512ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides45513ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides45514-
Paelopatides45515TRANSLATION INITIATION FACTOR EIF-2B
Paelopatides45516-
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