About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45584-
Paelopatides45585-
Paelopatides45586RNA BINDING PROTEIN
Paelopatides45587RNA BINDING PROTEIN
Paelopatides45588SERINE/THREONINE-PROTEIN KINASE
Paelopatides45589-
Paelopatides45590PROTEIN CBG26694
Paelopatides45591MYELIN-ASSOCIATED OLIGODENDROCYTIC BASIC PROTEIN MOBP -RELATED
Paelopatides45592MYELIN-ASSOCIATED OLIGODENDROCYTIC BASIC PROTEIN MOBP -RELATED
Paelopatides45593RETROTRANSPOSON
Paelopatides45594PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides45595PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides45596ANKYRIN REPEAT PROTEIN
Paelopatides45597TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides45598-
Paelopatides45599HEAT SHOCK PROTEIN 70KDA
Paelopatides45600HEAT SHOCK PROTEIN 70KDA
Paelopatides45601-
Paelopatides45602FI04643P-RELATED
Paelopatides45603-
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