About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_12306-1.1
Bpl_scaf_12310-1.6TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
Bpl_scaf_12327-0.10VOLTAGE-GATED POTASSIUM CHANNEL
Bpl_scaf_12327-0.9
Bpl_scaf_12327-1.13TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_12327-1.14HYDROXYSTEROID (11-BETA) DEHYDROGENASE 1-LIKE B-RELATED
Bpl_scaf_12327-1.16CORTICOTROPIN-RELEASING FACTOR-BINDING PROTEIN
Bpl_scaf_12327-1.36THAP DOMAIN-CONTAINING
Bpl_scaf_12327-1.38EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Bpl_scaf_12327-1.7
Bpl_scaf_12327-1.9HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Bpl_scaf_12337-0.22
Bpl_scaf_12337-0.23PROPERDIN
Bpl_scaf_12337-0.25
Bpl_scaf_12337-1.0
Bpl_scaf_12337-1.23PROPERDIN
Bpl_scaf_12337-1.24
Bpl_scaf_12337-1.25PROPERDIN
Bpl_scaf_12343-0.0
Bpl_scaf_12343-0.2
Bpl_scaf_12344-0.0ATP-DEPENDENT DNA HELICASE
Bpl_scaf_12350-0.0
Bpl_scaf_12351-0.3
Bpl_scaf_12351-0.6
Bpl_scaf_12351-1.2ARYL HYDROCARBON RECEPTOR
Bpl_scaf_12351-1.7ARYL HYDROCARBON RECEPTOR
Bpl_scaf_12351-2.10CENTROSOMAL PROTEIN OF 290 KDA
Bpl_scaf_12351-2.9
Bpl_scaf_12359-0.0COLLAGEN ALPHA
Bpl_scaf_1236-0.2CEREBELLIN-RELATED
Bpl_scaf_12360-0.7N-ACETYLGALACTOSAMINYLTRANSFERASE
Bpl_scaf_12360-0.8
Bpl_scaf_12360-1.0FORKHEAD BOX PROTEIN
Bpl_scaf_12360-1.4SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_12360-1.6SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_12360-2.1G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_12362-2.6D-DOPACHROME DECARBOXYLASE
Bpl_scaf_12362-2.7
Bpl_scaf_12363-0.2
Bpl_scaf_12363-0.7
Bpl_scaf_12363-0.8
Bpl_scaf_12363-1.10ATP-DEPENDENT DNA HELICASE
Bpl_scaf_12363-2.6AGAP001331-PA-RELATED
Bpl_scaf_12363-3.10
Bpl_scaf_12363-4.9TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 9
Bpl_scaf_12363-5.11
Bpl_scaf_12363-5.9
Bpl_scaf_12363-6.8
Bpl_scaf_12363-6.9
Bpl_scaf_12363-7.6DEATH DOMAIN-CONTAINING PROTEIN CRADD
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