About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_12183-0.9
Bpl_scaf_12190-0.2
Bpl_scaf_12190-0.4AGAP001331-PA-RELATED
Bpl_scaf_12200-0.4UNCHARACTERIZED
Bpl_scaf_12206-0.12
Bpl_scaf_12206-0.13
Bpl_scaf_12206-0.20
Bpl_scaf_12206-0.21
Bpl_scaf_12223-0.0REGULATOR OF G PROTEIN SIGNALING
Bpl_scaf_12223-0.7REGULATOR OF G PROTEIN SIGNALING
Bpl_scaf_12237-0.5ELECTRON TRANSPORT OXIDOREDUCTASE
Bpl_scaf_1224-0.0FIBRINOGEN ALPHA CHAIN
Bpl_scaf_12242-0.3CALCIUM BINDING PROTEINS
Bpl_scaf_1225-1.0
Bpl_scaf_1225-1.12ZGC:162509
Bpl_scaf_12251-0.1
Bpl_scaf_12251-0.21
Bpl_scaf_12251-0.3
Bpl_scaf_12251-0.4
Bpl_scaf_12257-0.9COLLAGEN ALPHA
Bpl_scaf_12273-0.0
Bpl_scaf_12273-0.1
Bpl_scaf_12273-0.11
Bpl_scaf_12273-0.12REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_12273-0.2
Bpl_scaf_12273-0.7ZINC FINGER PROTEIN
Bpl_scaf_12284-1.12PROTEIN STAR
Bpl_scaf_12284-1.7UBIQUITIN LIGASE E3 ALPHA-RELATED
Bpl_scaf_12284-1.8PROTEIN STAR
Bpl_scaf_12291-0.13BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_12291-0.15BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_12291-0.18DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
Bpl_scaf_12291-1.17
Bpl_scaf_12291-1.18BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_12291-1.19BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_12291-1.20
Bpl_scaf_12291-1.22BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_12291-1.28DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
Bpl_scaf_12291-1.36BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_12291-1.38
Bpl_scaf_12296-0.15FI02826P
Bpl_scaf_12296-0.16FI02826P
Bpl_scaf_12296-0.3MOLTING PROTEIN MLT-4
Bpl_scaf_12296-0.7
Bpl_scaf_12296-1.11SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_12296-1.12
Bpl_scaf_12296-1.13SAM DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_12296-1.8
Bpl_scaf_1230-0.2
Bpl_scaf_12306-0.4
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