About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06942BASIGIN RELATED
Paelopatides06943-
Paelopatides06944PROTEIN CBG26694
Paelopatides06945ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides06946-
Paelopatides06947CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides06948TRANSPOSABLE ELEMENT-RELATED
Paelopatides06949MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
Paelopatides06950-
Paelopatides06953-
Paelopatides06954-
Paelopatides06955IP22168P
Paelopatides06956-
Paelopatides06957FLAP ENDONUCLEASE FAMILY MEMBER
Paelopatides06958FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides06961PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides06963CARBOHYDRATE SULFOTRANSFERASE
Paelopatides06964ZINC FINGER PROTEIN
Paelopatides06965-
Paelopatides06966COX ASSEMBLY MITOCHONDRIAL PROTEIN
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