About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06842ENDONUCLEASE-RELATED
Paelopatides06843POL PROTEIN
Paelopatides06844-
Paelopatides06845PROTEIN CBG26694
Paelopatides06846PARANEOPLASTIC ANTIGEN
Paelopatides06847-
Paelopatides06848-
Paelopatides06849-
Paelopatides06850ARYLSULFATASE
Paelopatides06851UNCHARACTERIZED
Paelopatides06852REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides06853UNCHARACTERIZED
Paelopatides06854NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
Paelopatides06855GAG-RELATED PROTEIN
Paelopatides06856-
Paelopatides06857SI:CH211-196P9.1-RELATED
Paelopatides06858IP13529P
Paelopatides06859ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN
Paelopatides06860FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides06861ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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