About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_13267-0.0
Bpl_scaf_13270-0.0
Bpl_scaf_13278-0.0
Bpl_scaf_13278-0.4ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1
Bpl_scaf_13293-0.2NITRILASE-RELATED
Bpl_scaf_13302-0.2
Bpl_scaf_13302-0.3
Bpl_scaf_13316-0.4
Bpl_scaf_13339-0.5PARANEOPLASTIC ANTIGEN
Bpl_scaf_13339-0.6SOLUTE CARRIER FAMILY 17
Bpl_scaf_13363-0.0
Bpl_scaf_13363-0.1
Bpl_scaf_13391-0.6ENDONUCLEASE-RELATED
Bpl_scaf_13399-0.0
Bpl_scaf_13399-0.11
Bpl_scaf_13399-0.12
Bpl_scaf_13399-0.13
Bpl_scaf_13414-0.13MOLTING PROTEIN MLT-4
Bpl_scaf_13414-0.14
Bpl_scaf_13414-0.2
Bpl_scaf_13414-0.5ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Bpl_scaf_13425-0.1
Bpl_scaf_13445-0.0
Bpl_scaf_13455-0.4
Bpl_scaf_13455-0.6
Bpl_scaf_13468-0.1
Bpl_scaf_13468-0.7CYSTEINE PROTEASE FAMILY C1-RELATED
Bpl_scaf_13468-0.830S/40S RIBOSOMAL PROTEIN S3
Bpl_scaf_13483-0.0
Bpl_scaf_13483-0.3
Bpl_scaf_13483-0.6
Bpl_scaf_13483-0.8SUGAR HYDROLASE-RELATED
Bpl_scaf_13491-0.12UNCHARACTERIZED
Bpl_scaf_13492-0.4
Bpl_scaf_13492-0.5PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12
Bpl_scaf_13492-0.9PROTEIN CBG17840
Bpl_scaf_13492-1.3PARTNER OF SLD5
Bpl_scaf_13492-2.4ADENYLOSUCCINATE SYNTHETASE
Bpl_scaf_13492-2.5ACETYL-COENZYME A SYNTHETASE
Bpl_scaf_13492-3.2MYELIN TRANSCRIPTION FACTOR 1-RELATED
Bpl_scaf_13492-3.5MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B
Bpl_scaf_13492-4.5MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
Bpl_scaf_13492-4.6KIAA0586 PROTEIN
Bpl_scaf_13492-5.10PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12
Bpl_scaf_13492-5.11CHITIN BINDING PERITROPHIN-A
Bpl_scaf_13492-5.12TETRASPANIN
Bpl_scaf_13492-5.1326S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8
Bpl_scaf_13492-5.25
Bpl_scaf_13497-0.0
Bpl_scaf_13497-0.4ANKYRIN REPEAT PROTEIN
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