About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides076435-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides07644PROTEIN PHOSPHATASE 2C
Paelopatides07645-
Paelopatides07646PROTEIN CBG26694
Paelopatides07647PROTEIN CBG26694
Paelopatides07648-
Paelopatides07649BUCENTAUR RELATED
Paelopatides07650REVERSE TRANSCRIPTASES
Paelopatides07651-
Paelopatides07652-
Paelopatides07653GLYCOPROTEIN HORMONE BETA CHAIN
Paelopatides07654N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
Paelopatides07655ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides07656-
Paelopatides07657RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides07658ALPHA-MANNOSIDASE
Paelopatides07659MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides07660FTP DOMAIN-CONTAINING PROTEIN
Paelopatides07661-
Paelopatides07662-
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