About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07663REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07664FTP DOMAIN-CONTAINING PROTEIN
Paelopatides07665POL PROTEIN
Paelopatides07666ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides07667-
Paelopatides07668GLYCOSYLTRANSFERASE-RELATED
Paelopatides07669HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides07670-
Paelopatides07671SI:CH211-196P9.1-RELATED
Paelopatides07672-
Paelopatides07673POL PROTEIN
Paelopatides07674TRANSMEMBRANE PROTEIN 180
Paelopatides07675EPOXIDE HYDROLASE 1-RELATED
Paelopatides07676EPOXIDE HYDROLASE 1-RELATED
Paelopatides07677PROTEIN CBG26694
Paelopatides07678PROTEIN CBG26694
Paelopatides07679EPOXIDE HYDROLASE 1-RELATED
Paelopatides07680EPOXIDE HYDROLASE 1-RELATED
Paelopatides07681-
Paelopatides07682EPOXIDE HYDROLASE 1-RELATED
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