About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07623REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07624PRE-MRNA SPLICING FACTOR PRP31
Paelopatides07625PRE-MRNA SPLICING FACTOR PRP31
Paelopatides07626SH2-SH3 ADAPTOR PROTEIN-RELATED
Paelopatides07627PROTEIN CBG26694
Paelopatides07628COILED-COIL DOMAIN-CONTAINING PROTEIN 180
Paelopatides07629ZETA-COAT PROTEIN
Paelopatides07630-
Paelopatides07631BUCENTAUR RELATED
Paelopatides076322-5 OLIGOADENYLATE SYNTHETASE
Paelopatides07633-
Paelopatides07634FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides07635FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides07636-
Paelopatides07637CYTOSOLIC CARBOXYPEPTIDASE
Paelopatides07638-
Paelopatides07639-
Paelopatides07640POL PROTEIN
Paelopatides07641-
Paelopatides07642ADP RIBOSYLATION FACTOR-RELATED
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