About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07602PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides07603-
Paelopatides07604ENZYMATIC POLYPROTEIN-RELATED
Paelopatides07605ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides07606-
Paelopatides07607-
Paelopatides07608CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides0760952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides07610PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides07611RETROTRANSPOSON
Paelopatides07612-
Paelopatides07613EPM2A-INTERACTING PROTEIN 1
Paelopatides07615CAVEOLIN
Paelopatides07616PROTEIN CBG26694
Paelopatides07617PROTEIN CBG26694
Paelopatides07618PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides07619FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides07620NICASTRIN
Paelopatides07621ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1
Paelopatides07622EPM2A-INTERACTING PROTEIN 1
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