About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07724ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED
Paelopatides07725PROTEIN CBG26694
Paelopatides07726-
Paelopatides07727CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
Paelopatides07728LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides07729ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides07730BUCENTAUR RELATED
Paelopatides07731REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07732ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides07733T-LYMPHOCYTE ACTIVATION ANTIGEN
Paelopatides07734SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED
Paelopatides07735PROTEIN CBG26694
Paelopatides07736ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides07737FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides07738TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides07739ENDONUCLEASE
Paelopatides07740ASPARTYL PROTEASE DDI-RELATED
Paelopatides07741NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides07742-
Paelopatides07743SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
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