About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides08101SYNTAXIN
Paelopatides08102-
Paelopatides08103PROTEIN CBG26694
Paelopatides08104-
Paelopatides08105GABA-B RECEPTOR
Paelopatides08106PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides08107-
Paelopatides08108-
Paelopatides08109ALPHA-GLUCOSIDASE
Paelopatides08110OS05G0310600 PROTEIN
Paelopatides08111PROTEIN CBG26694
Paelopatides08112ENDONUCLEASE-RELATED
Paelopatides08113-
Paelopatides08114SER/THR PROTEIN KINASE ULK4
Paelopatides08115SER/THR PROTEIN KINASE ULK4
Paelopatides08116SER/THR PROTEIN KINASE ULK4
Paelopatides08117TYROSINE-PROTEIN KINASE
Paelopatides08118PROTEIN CBG26694
Paelopatides08119PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides08120PHD-TYPE DOMAIN-CONTAINING PROTEIN
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