About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07996MYOTUBULARIN-RELATED
Paelopatides07997PROTEIN CBG26694
Paelopatides07998-
Paelopatides07999YIPPEE DOMAIN-CONTAINING PROTEIN
Paelopatides08000-
Paelopatides08001-
Paelopatides08002COPPER HOMEOSTASIS PROTEIN CUTC
Paelopatides08003ENDONUCLEASE-RELATED
Paelopatides08004PEPTIDASE S8
Paelopatides08005COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides08006PROTEIN CBG26694
Paelopatides08007FUMARATE HYDRATASE-RELATED
Paelopatides08008-
Paelopatides08009-
Paelopatides08010-
Paelopatides08011-
Paelopatides08012-
Paelopatides08013ENZYMATIC POLYPROTEIN-RELATED
Paelopatides08014ENDONUCLEASE-RELATED
Paelopatides08015PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
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