About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides08039UNCHARACTERIZED
Paelopatides08040CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
Paelopatides08041L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides08042-
Paelopatides08043XANTHINE DEHYDROGENASE
Paelopatides08044PARANEOPLASTIC ANTIGEN
Paelopatides08045PROTEIN CBG26694
Paelopatides08046-
Paelopatides08047-
Paelopatides08048-
Paelopatides08049NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides08050REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides08051NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides08052-
Paelopatides08053REVERSE TRANSCRIPTASES
Paelopatides08054L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides08055DNA HELICASE RECQ FAMILY MEMBER
Paelopatides08056COILED-COIL DOMAIN-CONTAINING PROTEIN 40
Paelopatides08057INTERMEMBRANE PHOSPHOLIPID TRANSPORT SYSTEM BINDING PROTEIN MLAD-RELATED
Paelopatides08058COILED-COIL DOMAIN-CONTAINING PROTEIN 40
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