About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s051.g0101.t1MULTIDRUG RESISTANCE PROTEIN
Lsat_s051.g0102.t1WD40 REPEAT DOMAIN 95
Lsat_s051.g0103.t1MULTIDRUG RESISTANCE PROTEIN
Lsat_s051.g0104.t1WD40 REPEAT DOMAIN 95
Lsat_s051.g0105.t1
Lsat_s051.g0106.t1THROMBOSPONDIN TYPE I DOMAIN-CONTAINING 1
Lsat_s051.g0107.t1
Lsat_s051.g0108.t1
Lsat_s051.g0109.t1
Lsat_s051.g0110.t1
Lsat_s051.g0111.t1
Lsat_s051.g0112.t1
Lsat_s051.g0113.t1
Lsat_s051.g0114.t1TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Lsat_s051.g0115.t1
Lsat_s051.g0116.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s051.g0117.t1WD40 REPEAT PROTEIN
Lsat_s051.g0118.t1DESMOGLEIN FAMILY MEMBER
Lsat_s051.g0119.t1
Lsat_s051.g0120.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
Lsat_s051.g0121.t1
Lsat_s051.g0122.t1
Lsat_s051.g0123.t1BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR
Lsat_s051.g0124.t1SUGAR KINASE
Lsat_s051.g0125.t1TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
Lsat_s051.g0126.t1MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE
Lsat_s051.g0127.t1-
Lsat_s051.g0128.t1
Lsat_s051.g0129.t1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Lsat_s051.g0130.t1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Lsat_s051.g0131.t1
Lsat_s051.g0132.t1
Lsat_s051.g0133.t1
Lsat_s051.g0134.t1
Lsat_s051.g0135.t1
Lsat_s051.g0136.t1
Lsat_s051.g0137.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s051.g0138.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s051.g0139.t1AGAP008170-PA
Lsat_s051.g0140.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s051.g0141.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s051.g0142.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s051.g0143.t1
Lsat_s051.g0144.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s051.g0145.t1
Lsat_s051.g0146.t1SI:DKEY-19B23.12-RELATED
Lsat_s051.g0147.t1
Lsat_s051.g0148.t1MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
Lsat_s051.g0149.t1
Lsat_s051.g0150.t1
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