About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s053.g0131.t1
Lsat_s053.g0132.t1
Lsat_s053.g0133.t1
Lsat_s053.g0134.t15-HYDROXYTRYPTAMINE RECEPTOR
Lsat_s053.g0135.t1
Lsat_s053.g0136.t1
Lsat_s053.g0137.t1JITTERBUG, ISOFORM N
Lsat_s053.g0138.t1ADP RIBOSYLATION FACTOR-RELATED
Lsat_s053.g0139.t1
Lsat_s053.g0140.t1
Lsat_s053.g0141.t1
Lsat_s053.g0142.t1
Lsat_s053.g0143.t1CARBOHYDRATE SULFOTRANSFERASE
Lsat_s053.g0144.t1
Lsat_s053.g0145.t1DEATH DOMAIN-CONTAINING PROTEIN CRADD
Lsat_s053.g0146.t1
Lsat_s053.g0147.t1
Lsat_s053.g0148.t1
Lsat_s053.g0149.t1TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
Lsat_s053.g0150.t1
Lsat_s053.g0151.t1POLYCYSTIN FAMILY MEMBER
Lsat_s053.g0152.t1CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED
Lsat_s053.g0153.t1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A
Lsat_s053.g0154.t1SULFATASE MODIFYING FACTOR 1, 2
Lsat_s053.g0155.t1NUDIX T16 FAMILY MEMBER
Lsat_s053.g0156.t1ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8
Lsat_s053.g0157.t1PROTEIN CBG26694
Lsat_s053.g0158.t1GLUTATHIONE S-TRANSFERASE
Lsat_s053.g0159.t1GLUTATHIONE S-TRANSFERASE
Lsat_s053.g0160.t1LD44762P
Lsat_s053.g0161.t1
Lsat_s053.g0162.t1
Lsat_s053.g0163.t1
Lsat_s053.g0164.t1
Lsat_s053.g0165.t1MITOCHONDRIAL DYNAMICS PROTEINS 49/51 FAMILY MEMBER
Lsat_s054.g0001.t1
Lsat_s054.g0002.t1
Lsat_s054.g0003.t1
Lsat_s054.g0004.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s054.g0005.t1
Lsat_s054.g0006.t1
Lsat_s054.g0007.t1
Lsat_s054.g0008.t1
Lsat_s054.g0009.t1
Lsat_s054.g0010.t1PROTEIN B, PUTATIVE-RELATED-RELATED
Lsat_s054.g0011.t1
Lsat_s054.g0012.t1
Lsat_s054.g0013.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s054.g0014.t1TUBULIN
Lsat_s054.g0015.t1TUBULIN
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