About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s054.g0016.t1TUBULIN
Lsat_s054.g0017.t139S RIBOSOMAL PROTEIN L35, MITOCHONDRIAL
Lsat_s054.g0018.t1BRCA2 AND CDKN1A INTERACTING PROTEIN
Lsat_s054.g0019.t1TUBULIN
Lsat_s054.g0020.t1
Lsat_s054.g0021.t1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Lsat_s054.g0022.t1BTB DOMAIN-CONTAINING PROTEIN
Lsat_s054.g0023.t1SERINE PROTEASE FAMILY S1C HTRA-RELATED
Lsat_s054.g0024.t1GALACTOCEREBROSIDASE
Lsat_s054.g0025.t1GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE
Lsat_s054.g0026.t1
Lsat_s054.g0027.t1U4/U6.U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 27 KDA PROTEIN
Lsat_s054.g0028.t1UNCHARACTERIZED
Lsat_s054.g0029.t1
Lsat_s054.g0030.t1RAS-RELATED PROTEIN RAB
Lsat_s054.g0031.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s054.g0032.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s054.g0033.t1DELTEX-RELATED
Lsat_s054.g0034.t1DELTEX-RELATED
Lsat_s054.g0035.t1
Lsat_s054.g0036.t1ADDUCIN
Lsat_s054.g0037.t1E3 UBIQUITIN-PROTEIN LIGASE MARCH5
Lsat_s054.g0038.t1E3 UBIQUITIN-PROTEIN LIGASE MARCH5
Lsat_s054.g0039.t1
Lsat_s054.g0040.t1
Lsat_s054.g0041.t1HYPOTHETICAL PROTEIN LOC689986
Lsat_s054.g0042.t1
Lsat_s054.g0043.t1
Lsat_s054.g0044.t1
Lsat_s054.g0045.t1SI:DKEY-192D15.2-RELATED
Lsat_s054.g0046.t1MUCIN-22
Lsat_s054.g0047.t1NUCLEAR HORMONE RECEPTOR
Lsat_s054.g0048.t1
Lsat_s054.g0049.t1
Lsat_s054.g0050.t1
Lsat_s054.g0051.t1ENOLASE
Lsat_s054.g0052.t1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 53
Lsat_s054.g0053.t1
Lsat_s054.g0054.t1
Lsat_s054.g0055.t1ZGC:174356
Lsat_s054.g0056.t1
Lsat_s054.g0057.t1
Lsat_s054.g0058.t1ZGC:174356
Lsat_s054.g0059.t1
Lsat_s054.g0060.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s054.g0061.t1
Lsat_s054.g0062.t1
Lsat_s054.g0063.t1
Lsat_s054.g0064.t1
Lsat_s054.g0065.t1
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