About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s052.g0176.t1SI:CH211-266K2.1
Lsat_s052.g0177.t1KELCH PROTEIN
Lsat_s052.g0178.t1TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR
Lsat_s052.g0179.t1TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR
Lsat_s052.g0180.t1
Lsat_s052.g0181.t1TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR
Lsat_s052.g0182.t1PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
Lsat_s052.g0183.t1SELENIDE, WATER DIKINASE
Lsat_s052.g0184.t1SELENIDE, WATER DIKINASE
Lsat_s052.g0185.t1RNA-BINDING PROTEIN
Lsat_s052.g0186.t1C3ORF1 PROTEIN-RELATED
Lsat_s052.g0187.t1TWINFILIN
Lsat_s052.g0188.t1
Lsat_s052.g0189.t1RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Lsat_s052.g0190.t1RAD54-LIKE
Lsat_s052.g0191.t1G PROTEIN-COUPLED RECEPTOR-RELATED
Lsat_s052.g0192.t1
Lsat_s052.g0193.t1WD REPEAT DOMAIN-RELATED
Lsat_s052.g0194.t1DESMOGLEIN FAMILY MEMBER
Lsat_s052.g0195.t1
Lsat_s053.g0001.t1FIBRILLIN-RELATED
Lsat_s053.g0002.t1
Lsat_s053.g0003.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s053.g0004.t1
Lsat_s053.g0005.t1
Lsat_s053.g0006.t1TRANSCRIPTION INITIATION FACTOR TFIID
Lsat_s053.g0007.t1TRANSMEMBRANE PROTEIN ADIPOCYTE-ASSOCIATED 1
Lsat_s053.g0008.t1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
Lsat_s053.g0009.t1ADIPOR/PROGESTIN RECEPTOR-RELATED
Lsat_s053.g0010.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s053.g0011.t1RIBOSOMAL PROTEIN S6 KINASE
Lsat_s053.g0012.t1SI:DKEY-32E6.3
Lsat_s053.g0013.t1
Lsat_s053.g0014.t1
Lsat_s053.g0015.t1
Lsat_s053.g0016.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s053.g0017.t1
Lsat_s053.g0018.t1PROTEIN SIDEKICK
Lsat_s053.g0019.t1PIERCE HOMOLOG
Lsat_s053.g0020.t1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Lsat_s053.g0021.t1
Lsat_s053.g0022.t1
Lsat_s053.g0023.t1
Lsat_s053.g0024.t1UNCHARACTERIZED
Lsat_s053.g0025.t1
Lsat_s053.g0026.t1DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
Lsat_s053.g0027.t1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Lsat_s053.g0028.t1SERINE/THREONINE-PROTEIN KINASE TAO
Lsat_s053.g0029.t1
Lsat_s053.g0030.t1
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