Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s052.g0176.t1 | SI:CH211-266K2.1 |
Lsat_s052.g0177.t1 | KELCH PROTEIN |
Lsat_s052.g0178.t1 | TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR |
Lsat_s052.g0179.t1 | TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR |
Lsat_s052.g0180.t1 | |
Lsat_s052.g0181.t1 | TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR |
Lsat_s052.g0182.t1 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
Lsat_s052.g0183.t1 | SELENIDE, WATER DIKINASE |
Lsat_s052.g0184.t1 | SELENIDE, WATER DIKINASE |
Lsat_s052.g0185.t1 | RNA-BINDING PROTEIN |
Lsat_s052.g0186.t1 | C3ORF1 PROTEIN-RELATED |
Lsat_s052.g0187.t1 | TWINFILIN |
Lsat_s052.g0188.t1 | |
Lsat_s052.g0189.t1 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
Lsat_s052.g0190.t1 | RAD54-LIKE |
Lsat_s052.g0191.t1 | G PROTEIN-COUPLED RECEPTOR-RELATED |
Lsat_s052.g0192.t1 | |
Lsat_s052.g0193.t1 | WD REPEAT DOMAIN-RELATED |
Lsat_s052.g0194.t1 | DESMOGLEIN FAMILY MEMBER |
Lsat_s052.g0195.t1 | |
Lsat_s053.g0001.t1 | FIBRILLIN-RELATED |
Lsat_s053.g0002.t1 | |
Lsat_s053.g0003.t1 | SERINE/THREONINE-PROTEIN KINASE |
Lsat_s053.g0004.t1 | |
Lsat_s053.g0005.t1 | |
Lsat_s053.g0006.t1 | TRANSCRIPTION INITIATION FACTOR TFIID |
Lsat_s053.g0007.t1 | TRANSMEMBRANE PROTEIN ADIPOCYTE-ASSOCIATED 1 |
Lsat_s053.g0008.t1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
Lsat_s053.g0009.t1 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
Lsat_s053.g0010.t1 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Lsat_s053.g0011.t1 | RIBOSOMAL PROTEIN S6 KINASE |
Lsat_s053.g0012.t1 | SI:DKEY-32E6.3 |
Lsat_s053.g0013.t1 | |
Lsat_s053.g0014.t1 | |
Lsat_s053.g0015.t1 | |
Lsat_s053.g0016.t1 | ATILLA, ISOFORM B-RELATED-RELATED |
Lsat_s053.g0017.t1 | |
Lsat_s053.g0018.t1 | PROTEIN SIDEKICK |
Lsat_s053.g0019.t1 | PIERCE HOMOLOG |
Lsat_s053.g0020.t1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Lsat_s053.g0021.t1 | |
Lsat_s053.g0022.t1 | |
Lsat_s053.g0023.t1 | |
Lsat_s053.g0024.t1 | UNCHARACTERIZED |
Lsat_s053.g0025.t1 | |
Lsat_s053.g0026.t1 | DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE |
Lsat_s053.g0027.t1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
Lsat_s053.g0028.t1 | SERINE/THREONINE-PROTEIN KINASE TAO |
Lsat_s053.g0029.t1 | |
Lsat_s053.g0030.t1 |