About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s053.g0031.t1
Lsat_s053.g0032.t1SI:CH211-266K2.1
Lsat_s053.g0033.t1
Lsat_s053.g0034.t1PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7
Lsat_s053.g0035.t1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 10
Lsat_s053.g0036.t1
Lsat_s053.g0037.t1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 10
Lsat_s053.g0038.t1RAN BINDING PROTEIN
Lsat_s053.g0039.t1WD40 REPEAT PROTEIN SWD2
Lsat_s053.g0040.t1PROTEIN PHOSPHATASE 2C
Lsat_s053.g0041.t1ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1
Lsat_s053.g0042.t1TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1
Lsat_s053.g0043.t1
Lsat_s053.g0044.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1
Lsat_s053.g0045.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1
Lsat_s053.g0046.t1MYB-LIKE PROTEIN V
Lsat_s053.g0047.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1
Lsat_s053.g0048.t1
Lsat_s053.g0049.t1
Lsat_s053.g0050.t1
Lsat_s053.g0051.t1
Lsat_s053.g0052.t1
Lsat_s053.g0053.t1
Lsat_s053.g0054.t1HISTIDINE-RICH GLYCOPROTEIN
Lsat_s053.g0055.t1UBIQUITIN-ACTIVATING ENZYME E1
Lsat_s053.g0056.t1PLAT DOMAIN-CONTAINING PROTEIN
Lsat_s053.g0057.t1
Lsat_s053.g0058.t1ALPHA-1,2 MANNOSYLTRANSFERASE KTR1
Lsat_s053.g0059.t1PROTEIN CBG10425
Lsat_s053.g0060.t1
Lsat_s053.g0061.t1PROTEIN GAMETE EXPRESSED 1
Lsat_s053.g0062.t1HOST CELL FACTOR
Lsat_s053.g0063.t1
Lsat_s053.g0064.t139S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED
Lsat_s053.g0065.t1RGD1561648
Lsat_s053.g0066.t1RNA POLYMERASE II-ASSOCIATED PROTEIN 3
Lsat_s053.g0067.t1
Lsat_s053.g0068.t1
Lsat_s053.g0069.t1
Lsat_s053.g0070.t1
Lsat_s053.g0071.t1AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE
Lsat_s053.g0072.t1AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE
Lsat_s053.g0073.t1
Lsat_s053.g0074.t1
Lsat_s053.g0075.t1
Lsat_s053.g0076.t1TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Lsat_s053.g0077.t1
Lsat_s053.g0078.t1
Lsat_s053.g0079.t1
Lsat_s053.g0080.t1
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