About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_13985-0.59CARBOHYDRATE SULFOTRANSFERASE
Bpl_scaf_13985-0.60
Bpl_scaf_13985-0.61
Bpl_scaf_13985-0.63
Bpl_scaf_13985-0.64ZINC FINGER PROTEIN 142
Bpl_scaf_13985-0.9
Bpl_scaf_13986-0.5E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER
Bpl_scaf_13986-0.6DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2
Bpl_scaf_13986-1.6LOQUACIOUS, ISOFORM B
Bpl_scaf_13986-1.7RAD25/XP-B DNA REPAIR HELICASE
Bpl_scaf_13986-2.7CRUMBS FAMILY MEMBER
Bpl_scaf_13986-2.9PDF RECEPTOR-LIKE PROTEIN-RELATED
Bpl_scaf_13986-3.0
Bpl_scaf_13986-3.5DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_13986-3.6DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_13986-5.2
Bpl_scaf_13986-5.20BCL-2 RELATED
Bpl_scaf_13986-5.6RIBONUCLEASE P SUBUNIT P25
Bpl_scaf_13986-6.10
Bpl_scaf_13986-6.7
Bpl_scaf_13986-7.10PDF RECEPTOR-LIKE PROTEIN-RELATED
Bpl_scaf_13986-7.13EAP30 SUBUNIT OF ELL COMPLEX
Bpl_scaf_13987-0.2DIPHOSPHOMEVALONATE DECARBOXYLASE
Bpl_scaf_13988-0.9ADHESION G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_13988-1.12SUA5
Bpl_scaf_13988-1.19SIDESTEP PROTEIN
Bpl_scaf_13988-1.20
Bpl_scaf_13988-1.21ELONGIN-C
Bpl_scaf_13988-1.3
Bpl_scaf_13990-0.0DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN
Bpl_scaf_13990-0.11DOPAMINE BETA HYDROXYLASE RELATED
Bpl_scaf_13990-0.16
Bpl_scaf_13990-0.9
Bpl_scaf_13991-0.9EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Bpl_scaf_13995-0.2
Bpl_scaf_13996-0.8CYTOKINE RECEPTOR
Bpl_scaf_14002-0.1
Bpl_scaf_14002-1.10BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 1
Bpl_scaf_14002-1.8INHIBITOR OF APOPTOSIS
Bpl_scaf_14002-2.0
Bpl_scaf_14002-2.2G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_14002-3.1
Bpl_scaf_14002-3.3ARGININE OR CREATINE KINASE
Bpl_scaf_14004-0.0
Bpl_scaf_14004-0.1
Bpl_scaf_14013-0.0
Bpl_scaf_14013-0.7
Bpl_scaf_14013-2.6EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Bpl_scaf_14013-2.8NUCLEAR HORMONE RECEPTOR
Bpl_scaf_14013-3.15PRESEQUENCE PROTEASE
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