About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_14013-3.22ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Bpl_scaf_14065-0.3
Bpl_scaf_14066-0.11
Bpl_scaf_14076-0.6PREFOLDIN SUBUNIT 5
Bpl_scaf_14076-0.7EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_14076-1.0
Bpl_scaf_14076-1.10SKICH DOMAIN-CONTAINING PROTEIN
Bpl_scaf_14076-1.12CEREBELLIN-RELATED
Bpl_scaf_14076-2.0
Bpl_scaf_14076-3.6EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Bpl_scaf_14076-3.9ZINC FINGER-CONTAINING
Bpl_scaf_14076-4.0
Bpl_scaf_14076-4.10DESTABILASE-RELATED
Bpl_scaf_14081-0.8CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
Bpl_scaf_14094-0.1
Bpl_scaf_14105-0.0TOLL-LIKE RECEPTOR
Bpl_scaf_14109-0.15DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_14109-0.16THAP DOMAIN PROTEIN
Bpl_scaf_14109-0.2AGAP005574-PA
Bpl_scaf_14109-0.3DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_14129-0.7
Bpl_scaf_14129-0.8
Bpl_scaf_14138-0.7
Bpl_scaf_14153-0.10ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_14153-0.49ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_14153-0.51TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13
Bpl_scaf_14180-0.0
Bpl_scaf_14200-0.2ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 1
Bpl_scaf_14201-0.10NEPHRIN
Bpl_scaf_14210-0.0CELL FATE DETERMINING PROTEIN MAB21-RELATED
Bpl_scaf_14210-0.7
Bpl_scaf_14216-0.3GALACTOSE-3-O-SULFOTRANSFERASE
Bpl_scaf_14216-0.4BTB/POZ DOMAIN-CONTAINING PROTEIN 9
Bpl_scaf_14227-0.10
Bpl_scaf_14227-0.5
Bpl_scaf_14227-0.7
Bpl_scaf_14236-0.5BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_14236-0.7
Bpl_scaf_14246-0.0
Bpl_scaf_14259-0.0
Bpl_scaf_14261-0.5
Bpl_scaf_14269-0.11
Bpl_scaf_14269-0.12
Bpl_scaf_14269-0.13
Bpl_scaf_14269-0.19
Bpl_scaf_14269-0.20
Bpl_scaf_14273-0.3
Bpl_scaf_14282-0.18
Bpl_scaf_14282-0.23PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_14299-0.13SCAVENGER RECEPTOR CLASS F
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