About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_14299-0.14RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_14299-0.15
Bpl_scaf_14306-0.1REGULATOR OF G PROTEIN SIGNALING
Bpl_scaf_14315-0.7ATP-DEPENDENT DNA HELICASE
Bpl_scaf_14324-0.1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_14324-0.10BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_14324-0.16
Bpl_scaf_14335-0.12
Bpl_scaf_14335-0.13
Bpl_scaf_14335-0.8
Bpl_scaf_14345-0.2PUTATIVE-RELATED
Bpl_scaf_14345-0.5TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
Bpl_scaf_14365-0.17PROTEIN DISPATCHED-RELATED
Bpl_scaf_14365-0.8
Bpl_scaf_14372-0.11
Bpl_scaf_14372-0.13DESMOGLEIN FAMILY MEMBER
Bpl_scaf_14372-0.14PIKACHURIN-LIKE PROTEIN
Bpl_scaf_14372-0.3PIKACHURIN-LIKE PROTEIN
Bpl_scaf_14381-0.0
Bpl_scaf_14386-0.0
Bpl_scaf_14386-0.14
Bpl_scaf_14386-0.21
Bpl_scaf_14386-0.22
Bpl_scaf_14386-0.23DEATH DOMAIN-CONTAINING PROTEIN CRADD
Bpl_scaf_14399-0.17
Bpl_scaf_14399-0.18
Bpl_scaf_14399-0.21EXPRESSED PROTEIN
Bpl_scaf_14399-0.25MACROGLOBULIN / COMPLEMENT
Bpl_scaf_14408-0.10
Bpl_scaf_14408-0.11
Bpl_scaf_14408-0.2
Bpl_scaf_14417-0.0
Bpl_scaf_14417-0.12
Bpl_scaf_14417-0.13ANKYRIN REPEAT PROTEIN
Bpl_scaf_14423-0.1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_14423-0.13RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_14423-0.15RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_14423-0.18LITHOSTATHINE
Bpl_scaf_14423-0.19
Bpl_scaf_14423-0.21
Bpl_scaf_14431-0.11OTU DOMAIN CONTAINING PROTEIN
Bpl_scaf_14451-0.8SCAVENGER RECEPTOR CLASS F
Bpl_scaf_14460-0.4CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB
Bpl_scaf_14460-0.5RAS-RELATED PROTEIN RAB
Bpl_scaf_14460-1.11THAP DOMAIN PROTEIN
Bpl_scaf_14460-1.12DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_14461-1.20ZINC FINGER PROTEIN
Bpl_scaf_14461-2.11SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
Bpl_scaf_14461-2.4-
Bpl_scaf_14461-2.9DRAB5-RELATED
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