About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides08767PROTEIN DISPATCHED-RELATED
Paelopatides08768O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN
Paelopatides08769-
Paelopatides08770-
Paelopatides08771SI:CH211-108C17.2-RELATED-RELATED
Paelopatides0877260S RIBOSOMAL PROTEIN L4
Paelopatides08773DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]
Paelopatides08774-
Paelopatides08775DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]
Paelopatides08776-
Paelopatides08777-
Paelopatides08778FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides08779INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides08780CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides08781CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides08782-
Paelopatides08783G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN
Paelopatides08784ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides08785IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Paelopatides08786ADHESION G PROTEIN-COUPLED RECEPTOR G7
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