About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides08744ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides08745BONUS, ISOFORM C-RELATED
Paelopatides08746-
Paelopatides08747PROTEIN CBG23806
Paelopatides08748-
Paelopatides08749-
Paelopatides08750-
Paelopatides08751RGPR-RELATED
Paelopatides08752AXIN INTERACTOR, DORSALIZATION-ASSOCIATED PROTEIN
Paelopatides08753CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides08754REVERSE TRANSCRIPTASE
Paelopatides08755POL PROTEIN
Paelopatides08756GAG-RELATED PROTEIN
Paelopatides08757TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides08758PROTEIN CBG26694
Paelopatides08761-
Paelopatides08763-
Paelopatides08764-
Paelopatides08765-
Paelopatides08766SI:CH211-108C17.2-RELATED-RELATED
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