About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides08787-
Paelopatides08788GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides08789PROTEIN CBG26694
Paelopatides08790PROTEIN CBG26694
Paelopatides08791REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides08792TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides08793REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides08794REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides08796-
Paelopatides08797DNA2/NAM7 HELICASE FAMILY MEMBER
Paelopatides08798RIBONUCLEASE
Paelopatides08799DNA2/NAM7 HELICASE FAMILY
Paelopatides08800IRE1-RELATED
Paelopatides08801-
Paelopatides08802-
Paelopatides08803HUNTINGTON DISEASE PROTEIN
Paelopatides08804-
Paelopatides08805-
Paelopatides08806ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides08807TRANSMEMBRANE PROTEIN 180
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