About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09085REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09086PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides09087CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09089-
Paelopatides09090P-SELECTIN GLYCOPROTEIN LIGAND-1
Paelopatides09091-
Paelopatides09092REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09093-
Paelopatides09094N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D
Paelopatides09095N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D
Paelopatides09096THYMOCYTE NUCLEAR PROTEIN 1
Paelopatides09097-
Paelopatides09098NARDILYSIN
Paelopatides09099ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides09100ENDONUCLEASE
Paelopatides09101PROTEIN SIDEKICK
Paelopatides09102PROTEIN SIDEKICK
Paelopatides09103-
Paelopatides09104ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE
Paelopatides09105-
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