About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09127FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides09128CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides09129POL PROTEIN
Paelopatides09130ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides09131-
Paelopatides09132-
Paelopatides09133BUCENTAUR RELATED
Paelopatides09134REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09135-
Paelopatides09136-
Paelopatides09137-
Paelopatides09138PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides09139PROTEIN CBG26694
Paelopatides09140REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09141-
Paelopatides09142GAG-RELATED PROTEIN
Paelopatides09145-
Paelopatides09146-
Paelopatides09147-
Paelopatides09148-
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