About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09931-
Paelopatides09932APOLIPOPROTEIN L
Paelopatides09933ENDONUCLEASE-RELATED
Paelopatides09934ENZYMATIC POLYPROTEIN-RELATED
Paelopatides09935-
Paelopatides09936IP13529P
Paelopatides09939-
Paelopatides09940-
Paelopatides09941-
Paelopatides09945ENDONUCLEASE
Paelopatides09946FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides09947CYSTEINE PROTEASE FAMILY C1-RELATED
Paelopatides09948-
Paelopatides09949PROTEIN CBG26694
Paelopatides09950POTASSIUM CHANNEL, SUBFAMILY K
Paelopatides09951REVERSE TRANSCRIPTASES
Paelopatides09952REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09953POTASSIUM CHANNEL, SUBFAMILY K
Paelopatides09954GLYCOPROTEIN HORMONE RECEPTOR
Paelopatides09955GLYCOPROTEIN HORMONE RECEPTOR
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