About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10211-
Paelopatides10212ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides10213REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10214-
Paelopatides10215ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides10216ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides10217REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10218PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides10219PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides10220-
Paelopatides10221UNCHARACTERIZED
Paelopatides10222HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides10223ENDONUCLEASE-RELATED
Paelopatides10224-
Paelopatides10225-
Paelopatides10226-
Paelopatides10227-
Paelopatides10228-
Paelopatides10229SI:CH211-196P9.1-RELATED
Paelopatides10230SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
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