About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10542OS05G0310600 PROTEIN
Paelopatides10543EPOXIDE HYDROLASE 1-RELATED
Paelopatides10544PROTEIN CBG26694
Paelopatides10545ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides10546CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides10547PEPTIDASE
Paelopatides10548SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides10549-
Paelopatides10550-
Paelopatides10551BUCENTAUR RELATED
Paelopatides10552-
Paelopatides10553RAS-RELATED PROTEIN RAB
Paelopatides10554REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10555IP13529P
Paelopatides10556RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides10557ENDONUCLEASE
Paelopatides10558PROTEIN CBG26694
Paelopatides10559PROTEIN CBG26694
Paelopatides10560CELL DIVISION PROTEIN KINASE
Paelopatides10561LUPUS LA PROTEIN-RELATED
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