About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 45 46 47 48 49 50 51 52 53 54 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g12248LD33695P
Clavulariidae_g12249ACROSIN-RELATED
Clavulariidae_g1225CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g12250
Clavulariidae_g12251NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
Clavulariidae_g12252NB-ARC AND TPR DOMAIN PROTEIN
Clavulariidae_g12253CELLULAR TUMOR ANTIGEN P53
Clavulariidae_g12254RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Clavulariidae_g12255DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]
Clavulariidae_g122563-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE
Clavulariidae_g12257VOLTAGE-GATED POTASSIUM CHANNEL
Clavulariidae_g12258VOLTAGE-GATED POTASSIUM CHANNEL
Clavulariidae_g12259VOLTAGE-GATED POTASSIUM CHANNEL
Clavulariidae_g1226
Clavulariidae_g12260THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
Clavulariidae_g12261ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g12262CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Clavulariidae_g12263
Clavulariidae_g12264KERATIN, ULTRA HIGH-SULFUR MATRIX PROTEIN-LIKE
Clavulariidae_g12265PX DOMAIN-CONTAINING PROTEIN
Clavulariidae_g12266REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g12267
Clavulariidae_g12268
Clavulariidae_g12269TRANSPOSASE, PUTATIVE-RELATED
Clavulariidae_g1227INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Clavulariidae_g12270DEPHOSPHO-COA KINASE-RELATED
Clavulariidae_g12271ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
Clavulariidae_g12272
Clavulariidae_g12273ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
Clavulariidae_g12274RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Clavulariidae_g12275PROTEIN CBG26694
Clavulariidae_g12276INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Clavulariidae_g12277
Clavulariidae_g12278PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g12279ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
Clavulariidae_g1228
Clavulariidae_g12280CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g12281CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g12282CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g12283EXPRESSED PROTEIN
Clavulariidae_g12284
Clavulariidae_g12285CYSTINOSIN
Clavulariidae_g12286DEDICATOR OF CYTOKINESIS DOCK
Clavulariidae_g12287VOLTAGE-GATED POTASSIUM CHANNEL
Clavulariidae_g12288RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1
Clavulariidae_g12289
Clavulariidae_g1229
Clavulariidae_g12290
Clavulariidae_g12291
Clavulariidae_g12292
TOP