About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10956SI:CH211-108C17.2-RELATED-RELATED
Paelopatides10957-
Paelopatides10958LD44762P
Paelopatides10959-
Paelopatides10960ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS
Paelopatides10961-
Paelopatides10962-
Paelopatides10963L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides10964ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides10965NETRIN RECEPTOR UNC5
Paelopatides10966LIN37 HOMOLOG
Paelopatides10968-
Paelopatides10969CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides10970UNCHARACTERIZED
Paelopatides10971HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides10972-
Paelopatides10973CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides10975ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides10976-
Paelopatides10977PROTEIN CBG26694
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