About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides1093660S RIBOSOMAL PROTEIN L37
Paelopatides10937TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides10938TRANSPOSON
Paelopatides10939EPOXIDE HYDROLASE 1-RELATED
Paelopatides10940-
Paelopatides10941PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides10942PROTEIN CBG26694
Paelopatides10943ENDONUCLEASE-RELATED
Paelopatides10944ENDONUCLEASE-RELATED
Paelopatides10945PR DOMAIN ZINC FINGER PROTEIN
Paelopatides10946PROTEIN CBG26694
Paelopatides10947-
Paelopatides10948-
Paelopatides10949PROTEIN CBG26694
Paelopatides10950PROTEIN CBG26694
Paelopatides10951PROTEIN CBG26694
Paelopatides10952PROTEIN CBG26694
Paelopatides10953PROTEIN CBG26694
Paelopatides10954PROTEIN CBG26694
Paelopatides10955ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
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