About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11349UNCHARACTERIZED
Paelopatides11350AGAP008228-PA
Paelopatides11351RIBONUCLEASE
Paelopatides11352-
Paelopatides11363-
Paelopatides11364SPINDLIN
Paelopatides11365-
Paelopatides11366GLUTAMATE DECARBOXYLASE-RELATED
Paelopatides11367GLUTAMATE DECARBOXYLASE-RELATED
Paelopatides11368PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides11369-
Paelopatides11370-
Paelopatides11372PROTEIN CBG26694
Paelopatides11373NEURALIZED
Paelopatides11374METHYLTRANSFERASE
Paelopatides11375SI:CH211-108C17.2-RELATED-RELATED
Paelopatides11376-
Paelopatides11377-
Paelopatides1137840S RIBOSOMAL PROTEIN SA
Paelopatides11380-
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