About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11503PROTEIN CBG26694
Paelopatides11504SYNAPTOTAGMIN
Paelopatides11505-
Paelopatides11506-
Paelopatides11507-
Paelopatides11508EPM2A-INTERACTING PROTEIN 1
Paelopatides11509F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides11510PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides11511CRUMBS FAMILY MEMBER
Paelopatides11512REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides11513-
Paelopatides11514BUCENTAUR RELATED
Paelopatides11515POL PROTEIN
Paelopatides11516PROTEIN CBG26694
Paelopatides11517ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides11518SPECKLE-TYPE POZ PROTEIN
Paelopatides11519TRANSPOSABLE ELEMENT-RELATED
Paelopatides11520ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides11521SPECKLE-TYPE POZ PROTEIN
Paelopatides11522TRANSPOSON
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